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LODAC BDLS
LODAC BDLS (Building Dictionary for Life Sciense) provides two types of datasets. One is relationships between scientific names and common names of species. Another is... -
LinkedCT
Data exposed: Linked Clinical Trials Size of dump and data set: ~25 million triples as of April 2011. 4.8GB NTriples dump CC by-nc-sa license You are free to copy, distribute,... -
BioSamples RDF
The BioSamples database aggregates sample information for reference samples (e.g. Coriell Cell lines) and samples for which data exist in one of the EBI's assay databases such... -
Gene Expression Atlas RDF
The Gene Expression Atlas RDF provides information on gene expression patterns under different biological conditions. Gene expression data is re-analysed in-house to detect... -
ChEMBL RDF
ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and... -
DisGeNET
Linked Data version of DisGeNET, which is a Resource Description Framework (RDF) representation of DisGeNET a vast database integrating gene-disease associations from several... -
BioModels RDF
BioModels Database is a reliable repository of computational models of biological processes. It hosts models described in peer-reviewed scientific literature and models... -
Reactome RDF
BioPAX representation of the Reactome database -
Bio2RDF::HHPID
A database of HIV-1 human protein interactions that was created to catalog all interactions between HIV-1 and human proteins published in the peer-reviewed literature. The... -
TCMGeneDIT Dataset
Data exposed: Traditional Chinese medicine, gene and disease association dataset and a linkset mapping TCM gene symbols to Extrez Gene IDs created by Neurocommons Size of dump... -
MeSH pairs
Data exposed: NLM 2007 MeSH descriptor/qualifier pairs Size of dump and data set: 13 MB Openness: OPEN See http://www.nlm.nih.gov/mesh/termscon.html (basically attribution with... -
Yale Senselab
About Data exposed: Yale Senselab Size of dump and data set: 216 KB Notes: released without contract The Semantic Web development of SenseLab involves exporting data from... -
Allen Brain Atlas
About The Allen Mouse Brain Atlas is an interactive, genome-wide image database of gene expression. Data exposed: Science Commons extract from ABA Web site, on or shortly before... -
Entrez Gene
About Data exposed: Select fields from Entrez Gene records Size of dump and data set: 7.7 MB Notes: NCBI Copyright and Disclaimers Openness Data appears to be in public domain.... -
Neurocommons text mining pilot
About The complete dataset is composed of a set of smaller datasets. Each download is in one of two formats: (1) WARC or (2) tar.gz. You can read about the WARC format by... -
Science Commons
Data exposed: A bridging ontology, from Science Commons, importing other ontologies used in the prototype, defining classes and relations used to represent gene records and... -
BBOP
Data exposed: selected OBO ontologies, downloaded ~21 April 2007, augmented with inferred relations Size of dump and data set: 2.6 MB Notes: released without contract -
BBOP
Data exposed: All OBO ontologies Size of dump and data set: 36 MB Notes: Berkeley Bioinformatics Open-source Projects(BBOP); released without contract